Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SHC3Q92529 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
SHC3Q92529 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SHC3Q92529 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SHC3Q92529 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SHC3Q92529 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SHC3Q92529 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.12■□□□□ 0.17
SHC3Q92529 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.12■□□□□ 0.17
SHC3Q92529 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SHC3Q92529 ACTG1P3-201ENST00000431775 1114 ntBASIC16.12■□□□□ 0.17
SHC3Q92529 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 AC012441.1-201ENST00000446669 685 ntBASIC16.12■□□□□ 0.17
SHC3Q92529 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.12■□□□□ 0.17
SHC3Q92529 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.12■□□□□ 0.17
SHC3Q92529 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.12■□□□□ 0.17
SHC3Q92529 MIR5189-201ENST00000577370 114 ntBASIC16.12■□□□□ 0.17
SHC3Q92529 AC092364.2-202ENST00000597012 1073 ntBASIC16.12■□□□□ 0.17
SHC3Q92529 AC004466.1-201ENST00000599515 1080 ntBASIC16.12■□□□□ 0.17
SHC3Q92529 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.12■□□□□ 0.17
SHC3Q92529 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SHC3Q92529 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.12■□□□□ 0.17
SHC3Q92529 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.12■□□□□ 0.17
SHC3Q92529 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.12■□□□□ 0.17
SHC3Q92529 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.12■□□□□ 0.17
SHC3Q92529 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.12■□□□□ 0.17
SHC3Q92529 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHC3Q92529 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.11■□□□□ 0.17
SHC3Q92529 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 AC005089.1-201ENST00000619486 2241 ntBASIC16.11■□□□□ 0.17
SHC3Q92529 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 AL354702.1-201ENST00000442006 1960 ntBASIC16.11■□□□□ 0.17
SHC3Q92529 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 AC067930.6-201ENST00000623257 4947 ntBASIC16.11■□□□□ 0.17
SHC3Q92529 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SHC3Q92529 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.11■□□□□ 0.17
SHC3Q92529 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 AC097359.2-201ENST00000604992 2389 ntBASIC16.11■□□□□ 0.17
SHC3Q92529 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.11■□□□□ 0.17
SHC3Q92529 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SHC3Q92529 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.11■□□□□ 0.17
SHC3Q92529 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.11■□□□□ 0.17
SHC3Q92529 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 AC138761.1-201ENST00000584393 385 ntBASIC16.11■□□□□ 0.17
SHC3Q92529 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SHC3Q92529 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SHC3Q92529 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
SHC3Q92529 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 AC026748.1-201ENST00000624349 3251 ntBASIC16.11■□□□□ 0.17
SHC3Q92529 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHC3Q92529 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms