Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.14■□□□□ 0.18
LMO3Q8TAP4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 AGGF1P1-201ENST00000509500 2073 ntBASIC16.14■□□□□ 0.17
LMO3Q8TAP4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 TMEM14DP-201ENST00000422205 345 ntBASIC16.14■□□□□ 0.17
LMO3Q8TAP4 AC245100.3-201ENST00000441281 285 ntBASIC16.14■□□□□ 0.17
LMO3Q8TAP4 AC007389.4-201ENST00000454674 793 ntBASIC16.14■□□□□ 0.17
LMO3Q8TAP4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 RN7SL48P-201ENST00000579283 293 ntBASIC16.14■□□□□ 0.17
LMO3Q8TAP4 AC138696.2-201ENST00000607376 223 ntBASIC16.14■□□□□ 0.17
LMO3Q8TAP4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 IGHV3-72-202ENST00000621503 303 ntBASIC16.14■□□□□ 0.17
LMO3Q8TAP4 ENPP7P14-201ENST00000621765 1040 ntBASIC16.14■□□□□ 0.17
LMO3Q8TAP4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LMO3Q8TAP4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 AC005229.1-201ENST00000392885 409 ntBASIC16.13■□□□□ 0.17
LMO3Q8TAP4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 SLC25A47P1-201ENST00000531577 414 ntBASIC16.13■□□□□ 0.17
LMO3Q8TAP4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 AC025279.2-201ENST00000569730 653 ntBASIC16.13■□□□□ 0.17
LMO3Q8TAP4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 AC027307.3-201ENST00000594262 1100 ntBASIC16.13■□□□□ 0.17
LMO3Q8TAP4 AC008735.3-201ENST00000596646 500 ntBASIC16.13■□□□□ 0.17
LMO3Q8TAP4 AC138466.3-201ENST00000619983 221 ntBASIC16.13■□□□□ 0.17
LMO3Q8TAP4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms