Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 AL160191.2-201ENST00000603975 601 ntBASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL22A1Q8NFW1 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 RN7SL147P-201ENST00000487345 298 ntBASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 BCRP4-201ENST00000506079 804 ntBASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL22A1Q8NFW1 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 SNORA57-201ENST00000383870 149 ntBASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AC019109.1-201ENST00000401725 1874 ntBASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AC008026.2-201ENST00000495438 348 ntBASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 KLF17P1-201ENST00000547105 1126 ntBASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AL132994.1-201ENST00000554098 400 ntBASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 DUT-207ENST00000559416 635 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 NDUFB10P1-201ENST00000567319 521 ntBASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 AC092570.1-201ENST00000414446 469 ntBASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 KRT18P4-201ENST00000422599 1288 ntBASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms