Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 AL355864.2-201ENST00000447420 863 ntBASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC148Q8NFR7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 GIMAP3P-201ENST00000495150 836 ntBASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 DUX4L47-201ENST00000566374 394 ntBASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 AC008735.3-201ENST00000596646 500 ntBASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 MSTO2P-201ENST00000314835 1709 ntBASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms