Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 RPL13AP25-201ENST00000484130 612 ntBASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 DOC2GP-202ENST00000514950 1163 ntBASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 RFPL4AP1-201ENST00000530883 850 ntBASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 AC106028.4-201ENST00000614509 607 ntBASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
LSMEM1Q8N8F7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AL138799.1-201ENST00000448213 1675 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AL353779.1-201ENST00000434793 351 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 TPRX2P-201ENST00000535362 881 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AC023310.3-201ENST00000557027 670 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AC100756.1-201ENST00000562736 682 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AC138749.3-201ENST00000567691 622 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AC005498.2-205ENST00000593218 784 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AC116165.1-201ENST00000611806 668 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AC004790.1-201ENST00000612686 536 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AL662799.1-202ENST00000614205 422 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 LINC00552-201ENST00000625151 2579 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 AC117489.1-201ENST00000625169 3217 ntBASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LSMEM1Q8N8F7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms