Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 MIR658-201ENST00000385210 100 ntBASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 COX11-210ENST00000639671 696 ntBASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 KRT223P-202ENST00000449164 1292 ntBASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 AC119751.2-201ENST00000504529 210 ntBASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 LINC00554-201ENST00000564841 3011 ntBASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAM1L1Q8N609 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 AHCYP2-201ENST00000430630 1300 ntBASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 AJ011931.1-201ENST00000618749 2492 ntBASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAM1L1Q8N609 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms