Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 FGD5P1-202ENST00000614866 2498 ntBASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 AC007541.1-201ENST00000570282 1469 ntBASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 INTS4P2-202ENST00000614726 2019 ntBASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 LILRP1-201ENST00000444199 1370 ntBASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TTC9CQ8N5M4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms