Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 AL161772.1-201ENST00000610494 4412 ntBASIC15.21■□□□□ 0.03
RBFAQ8N0V3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 FO681548.1-201ENST00000455617 1132 ntBASIC15.21■□□□□ 0.03
RBFAQ8N0V3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 MIR4538-201ENST00000581377 78 ntBASIC15.21■□□□□ 0.03
RBFAQ8N0V3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBFAQ8N0V3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.21■□□□□ 0.02
RBFAQ8N0V3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.2■□□□□ 0.02
RBFAQ8N0V3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 ACKR1-201ENST00000368121 1240 ntBASIC15.2■□□□□ 0.02
RBFAQ8N0V3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 AL645937.2-201ENST00000396808 931 ntBASIC15.2■□□□□ 0.02
RBFAQ8N0V3 AC026954.1-201ENST00000429771 1293 ntBASIC15.2■□□□□ 0.02
RBFAQ8N0V3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 AL136379.1-201ENST00000623471 2642 ntBASIC15.2■□□□□ 0.02
RBFAQ8N0V3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 TNRC18P2-201ENST00000417666 2714 ntBASIC15.2■□□□□ 0.02
RBFAQ8N0V3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 REXO1L2P-201ENST00000425429 2069 ntBASIC15.2■□□□□ 0.02
RBFAQ8N0V3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBFAQ8N0V3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBFAQ8N0V3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBFAQ8N0V3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms