Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RP1L1Q8IWN7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RP1L1Q8IWN7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 YRDCP1-201ENST00000621419 643 ntBASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 AC004923.1-202ENST00000642106 209 ntBASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 AC100850.1-201ENST00000506768 649 ntBASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 AL023803.2-201ENST00000620080 638 ntBASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RP1L1Q8IWN7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
RP1L1Q8IWN7 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RP1L1Q8IWN7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RP1L1Q8IWN7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.75□□□□□ -0.21
RP1L1Q8IWN7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.75□□□□□ -0.21
RP1L1Q8IWN7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RP1L1Q8IWN7 AL391280.1-201ENST00000506969 1062 ntBASIC13.75□□□□□ -0.21
RP1L1Q8IWN7 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.75□□□□□ -0.21
RP1L1Q8IWN7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.75□□□□□ -0.21
RP1L1Q8IWN7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms