Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 AC007787.1-201ENST00000588095 1583 ntBASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 LILRP1-201ENST00000444199 1370 ntBASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 AC004066.1-201ENST00000502488 802 ntBASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 AC036164.1-201ENST00000570544 333 ntBASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 AC005498.2-205ENST00000593218 784 ntBASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 AC006538.3-201ENST00000612495 578 ntBASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LINC00346Q8IVM7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 MRPS18AP1-201ENST00000414458 589 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 BASP1P1-201ENST00000430708 665 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 FAM86LP-201ENST00000478302 853 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 DOC2GP-202ENST00000514950 1163 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 TPRX2P-201ENST00000535362 881 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC023310.3-201ENST00000557027 670 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC100756.1-201ENST00000562736 682 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC138749.3-201ENST00000567691 622 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms