Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 SLC25A24P2-201ENST00000415059 510 ntBASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 AKR7A2P1-201ENST00000460134 915 ntBASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 COX5BP1-201ENST00000507622 393 ntBASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 AL365209.1-201ENST00000624418 6473 ntBASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA11Q86Y39 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 HNRNPA1P32-201ENST00000396326 963 ntBASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 MIR663B-201ENST00000408361 115 ntBASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 ZACNP1-201ENST00000612259 710 ntBASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 AL096828.3-201ENST00000615354 462 ntBASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
NDUFA11Q86Y39 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms