Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAPH1Q70E73 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
RAPH1Q70E73 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RAPH1Q70E73 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
RAPH1Q70E73 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.33■□□□□ 0.05
RAPH1Q70E73 REXO1L4P-201ENST00000605109 1937 ntBASIC15.33■□□□□ 0.05
RAPH1Q70E73 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAPH1Q70E73 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
RAPH1Q70E73 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RAPH1Q70E73 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAPH1Q70E73 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAPH1Q70E73 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 AC006504.5-208ENST00000588784 2401 ntBASIC15.33■□□□□ 0.04
RAPH1Q70E73 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 AL596442.2-201ENST00000610240 980 ntBASIC15.33■□□□□ 0.04
RAPH1Q70E73 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 AC010327.5-201ENST00000586923 3061 ntBASIC15.33■□□□□ 0.04
RAPH1Q70E73 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.33■□□□□ 0.04
RAPH1Q70E73 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.33■□□□□ 0.04
RAPH1Q70E73 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAPH1Q70E73 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.33■□□□□ 0.04
RAPH1Q70E73 AL121723.1-201ENST00000445194 1519 ntBASIC15.33■□□□□ 0.04
RAPH1Q70E73 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 RPL13P2-201ENST00000440687 659 ntBASIC15.32■□□□□ 0.04
RAPH1Q70E73 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 HLA-V-204ENST00000476601 1289 ntBASIC15.32■□□□□ 0.04
RAPH1Q70E73 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 AC074044.1-201ENST00000609673 707 ntBASIC15.32■□□□□ 0.04
RAPH1Q70E73 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 SPDYE12P-201ENST00000618416 771 ntBASIC15.32■□□□□ 0.04
RAPH1Q70E73 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAPH1Q70E73 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.32■□□□□ 0.04
RAPH1Q70E73 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms