Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 RN7SL618P-201ENST00000477850 296 ntBASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 AC138969.3-201ENST00000546612 1459 ntBASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 AC138932.2-201ENST00000548268 1459 ntBASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 AC126755.4-201ENST00000549796 1459 ntBASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 AC097359.2-201ENST00000604992 2389 ntBASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 CNN2P11-201ENST00000429351 262 ntBASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 TEX28P1-201ENST00000613479 1221 ntBASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 TEX28P2-201ENST00000617764 1221 ntBASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 AC041040.2-201ENST00000622926 2899 ntBASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
SMARCD3Q6STE5 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 AC005840.4-201ENST00000541242 2494 ntBASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 AP000347.1-202ENST00000435868 847 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms