Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
VPS13DQ5THJ4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13DQ5THJ4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC9.86□□□□□ -0.83
VPS13DQ5THJ4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC9.86□□□□□ -0.83
VPS13DQ5THJ4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
VPS13DQ5THJ4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13DQ5THJ4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC091951.1-201ENST00000512854 2465 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 NME2-201ENST00000393183 568 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC018638.5-201ENST00000450885 754 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC138466.5-201ENST00000624002 808 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 PGAM1P12-201ENST00000505622 748 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 RNA5SP417-201ENST00000516459 108 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 DBP-202ENST00000593500 712 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC011471.3-201ENST00000623576 402 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AL672207.1-201ENST00000328462 1570 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 ACTBP7-201ENST00000418351 1124 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC024293.1-201ENST00000467930 498 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC084752.1-201ENST00000509766 622 ntBASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 MBP-238ENST00000580402 915 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13DQ5THJ4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AGGF1P1-201ENST00000509500 2073 ntBASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 MIR645-201ENST00000385283 94 ntBASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AC011247.3-201ENST00000603297 438 ntBASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms