Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 AC015802.1-201ENST00000588104 1449 ntBASIC14.44□□□□□ -0.1
CHRNB3Q05901 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 AL671277.1-201ENST00000429656 993 ntBASIC14.44□□□□□ -0.1
CHRNB3Q05901 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 AC131212.3-201ENST00000624087 4219 ntBASIC14.44□□□□□ -0.1
CHRNB3Q05901 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRNB3Q05901 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 SPDYE11-202ENST00000450699 704 ntBASIC14.43□□□□□ -0.1
CHRNB3Q05901 RN7SL589P-201ENST00000481268 310 ntBASIC14.43□□□□□ -0.1
CHRNB3Q05901 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 AC004449.1-201ENST00000564240 433 ntBASIC14.43□□□□□ -0.1
CHRNB3Q05901 SPDYE9P-201ENST00000570642 692 ntBASIC14.43□□□□□ -0.1
CHRNB3Q05901 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 AC026120.1-201ENST00000611536 926 ntBASIC14.43□□□□□ -0.1
CHRNB3Q05901 SPDYE10P-202ENST00000612005 668 ntBASIC14.43□□□□□ -0.1
CHRNB3Q05901 SPDYE8P-202ENST00000612377 668 ntBASIC14.43□□□□□ -0.1
CHRNB3Q05901 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 AL513210.1-201ENST00000629608 234 ntBASIC14.43□□□□□ -0.1
CHRNB3Q05901 AC105339.1-204ENST00000636249 355 ntBASIC14.43□□□□□ -0.1
CHRNB3Q05901 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms