Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDKL1Q00532 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKL1Q00532 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDKL1Q00532 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL1Q00532 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL1Q00532 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDKL1Q00532 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 C8orf49-201ENST00000525043 1968 ntBASIC14.97□□□□□ -0.01
CDKL1Q00532 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
CDKL1Q00532 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL1Q00532 SPDYE19P-201ENST00000338590 713 ntBASIC14.97□□□□□ -0.01
CDKL1Q00532 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKL1Q00532 AL645937.2-201ENST00000396808 931 ntBASIC14.97□□□□□ -0.01
CDKL1Q00532 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDKL1Q00532 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.97□□□□□ -0.01
CDKL1Q00532 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKL1Q00532 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL1Q00532 AL662799.1-202ENST00000614205 422 ntBASIC14.97□□□□□ -0.01
CDKL1Q00532 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKL1Q00532 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDKL1Q00532 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL1Q00532 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL1Q00532 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDKL1Q00532 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.96□□□□□ -0.01
CDKL1Q00532 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDKL1Q00532 AC093525.8-201ENST00000624099 1342 ntBASIC14.96□□□□□ -0.01
CDKL1Q00532 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDKL1Q00532 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.96□□□□□ -0.01
CDKL1Q00532 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.96□□□□□ -0.01
CDKL1Q00532 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CDKL1Q00532 INGX-202ENST00000489074 768 ntBASIC14.96□□□□□ -0.01
CDKL1Q00532 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKL1Q00532 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
CDKL1Q00532 AC055876.2-201ENST00000531834 546 ntBASIC14.96□□□□□ -0.01
CDKL1Q00532 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDKL1Q00532 AC007787.1-201ENST00000588095 1583 ntBASIC14.96□□□□□ -0.01
CDKL1Q00532 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKL1Q00532 BRI3BPP1-201ENST00000594224 787 ntBASIC14.96□□□□□ -0.01
CDKL1Q00532 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDKL1Q00532 AL049840.4-201ENST00000602422 811 ntBASIC14.96□□□□□ -0.01
CDKL1Q00532 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
CDKL1Q00532 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDKL1Q00532 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CDKL1Q00532 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDKL1Q00532 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.96□□□□□ -0.01
CDKL1Q00532 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL1Q00532 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDKL1Q00532 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDKL1Q00532 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CDKL1Q00532 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDKL1Q00532 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.96□□□□□ -0.02
CDKL1Q00532 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CDKL1Q00532 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CDKL1Q00532 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL1Q00532 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.95□□□□□ -0.02
CDKL1Q00532 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL1Q00532 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL1Q00532 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKL1Q00532 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms