Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
HSPG2P98160 AL662844.4-201ENST00000606367 2838 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
HSPG2P98160 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC9.03□□□□□ -0.96
HSPG2P98160 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
HSPG2P98160 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC9.03□□□□□ -0.96
HSPG2P98160 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 ALG1L7P-201ENST00000502317 768 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
HSPG2P98160 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 AC127383.1-201ENST00000444697 1800 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 AC136604.1-202ENST00000425471 771 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC9.03□□□□□ -0.96
HSPG2P98160 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC9.03□□□□□ -0.96
HSPG2P98160 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
HSPG2P98160 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC9.03□□□□□ -0.96
HSPG2P98160 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC9.03□□□□□ -0.96
HSPG2P98160 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 VENTXP3-201ENST00000546480 773 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC9.03□□□□□ -0.96
HSPG2P98160 NEK4P3-201ENST00000604859 544 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 BX088702.1-201ENST00000610784 235 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 AC015912.3-201ENST00000619432 348 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC9.03□□□□□ -0.96
HSPG2P98160 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC9.03□□□□□ -0.96
HSPG2P98160 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC9.03□□□□□ -0.96
HSPG2P98160 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 KRT18P4-201ENST00000422599 1288 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC9.03□□□□□ -0.96
HSPG2P98160 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
HSPG2P98160 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 MIR2278-201ENST00000516344 96 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 AC087203.1-201ENST00000532111 1181 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC9.03□□□□□ -0.96
HSPG2P98160 AC016582.2-202ENST00000587765 1094 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC9.03□□□□□ -0.96
HSPG2P98160 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC9.03□□□□□ -0.96
HSPG2P98160 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC9.03□□□□□ -0.96
HSPG2P98160 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HSPG2P98160 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC9.02□□□□□ -0.96
HSPG2P98160 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
HSPG2P98160 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC9.02□□□□□ -0.96
HSPG2P98160 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
HSPG2P98160 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC9.02□□□□□ -0.96
HSPG2P98160 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
HSPG2P98160 MSANTD2P1-201ENST00000445341 1368 ntBASIC9.02□□□□□ -0.96
HSPG2P98160 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC9.02□□□□□ -0.96
HSPG2P98160 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
HSPG2P98160 SIRPB3P-201ENST00000340424 1216 ntBASIC9.02□□□□□ -0.97
HSPG2P98160 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC9.02□□□□□ -0.97
HSPG2P98160 RN7SL602P-201ENST00000578326 324 ntBASIC9.02□□□□□ -0.97
HSPG2P98160 RN7SL718P-201ENST00000581254 303 ntBASIC9.02□□□□□ -0.97
HSPG2P98160 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC9.02□□□□□ -0.97
HSPG2P98160 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 AC026471.1-201ENST00000564629 3026 ntBASIC9.02□□□□□ -0.97
HSPG2P98160 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms