Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 AC005229.1-201ENST00000392885 409 ntBASIC13.47□□□□□ -0.25
NKX6-1P78426 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX6-1P78426 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
NKX6-1P78426 AL355864.2-201ENST00000447420 863 ntBASIC13.47□□□□□ -0.25
NKX6-1P78426 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.47□□□□□ -0.25
NKX6-1P78426 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.47□□□□□ -0.25
NKX6-1P78426 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX6-1P78426 BRI3BPP1-201ENST00000594224 787 ntBASIC13.47□□□□□ -0.25
NKX6-1P78426 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 AC010328.2-201ENST00000597698 1111 ntBASIC13.47□□□□□ -0.25
NKX6-1P78426 AC243960.2-201ENST00000600996 747 ntBASIC13.47□□□□□ -0.25
NKX6-1P78426 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX6-1P78426 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
NKX6-1P78426 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 AC138035.3-201ENST00000622706 2791 ntBASIC13.47□□□□□ -0.25
NKX6-1P78426 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.47□□□□□ -0.25
NKX6-1P78426 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 AP005117.1-202ENST00000581724 1908 ntBASIC13.47□□□□□ -0.25
NKX6-1P78426 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX6-1P78426 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NKX6-1P78426 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX6-1P78426 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX6-1P78426 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
NKX6-1P78426 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NKX6-1P78426 AC092506.1-202ENST00000401022 528 ntBASIC13.46□□□□□ -0.25
NKX6-1P78426 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.46□□□□□ -0.25
NKX6-1P78426 YBX1P6-201ENST00000442962 1002 ntBASIC13.46□□□□□ -0.25
NKX6-1P78426 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX6-1P78426 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX6-1P78426 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX6-1P78426 ENPP7P5-201ENST00000541031 1031 ntBASIC13.46□□□□□ -0.25
NKX6-1P78426 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
NKX6-1P78426 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX6-1P78426 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.46□□□□□ -0.26
NKX6-1P78426 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.46□□□□□ -0.26
NKX6-1P78426 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.46□□□□□ -0.26
NKX6-1P78426 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-1P78426 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.46□□□□□ -0.26
NKX6-1P78426 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-1P78426 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
NKX6-1P78426 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-1P78426 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-1P78426 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NKX6-1P78426 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
NKX6-1P78426 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX6-1P78426 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.45□□□□□ -0.26
NKX6-1P78426 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX6-1P78426 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-1P78426 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms