Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAE1P78406 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.36□□□□□ -0.11
RAE1P78406 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAE1P78406 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAE1P78406 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.36□□□□□ -0.11
RAE1P78406 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.36□□□□□ -0.11
RAE1P78406 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAE1P78406 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.36□□□□□ -0.11
RAE1P78406 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAE1P78406 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAE1P78406 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 AC015802.1-201ENST00000588104 1449 ntBASIC14.35□□□□□ -0.11
RAE1P78406 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
RAE1P78406 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.35□□□□□ -0.11
RAE1P78406 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAE1P78406 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.35□□□□□ -0.11
RAE1P78406 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAE1P78406 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RAE1P78406 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.35□□□□□ -0.11
RAE1P78406 WFDC1-204ENST00000613603 549 ntBASIC14.35□□□□□ -0.11
RAE1P78406 AP005019.2-201ENST00000615104 511 ntBASIC14.35□□□□□ -0.11
RAE1P78406 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.35□□□□□ -0.11
RAE1P78406 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAE1P78406 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAE1P78406 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAE1P78406 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAE1P78406 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAE1P78406 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RAE1P78406 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RAE1P78406 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAE1P78406 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RAE1P78406 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 GIMAP3P-201ENST00000495150 836 ntBASIC14.34□□□□□ -0.11
RAE1P78406 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.34□□□□□ -0.11
RAE1P78406 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.34□□□□□ -0.11
RAE1P78406 ENPP7P5-201ENST00000541031 1031 ntBASIC14.34□□□□□ -0.11
RAE1P78406 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.34□□□□□ -0.11
RAE1P78406 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.34□□□□□ -0.11
RAE1P78406 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.34□□□□□ -0.11
RAE1P78406 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 AC004466.1-201ENST00000599515 1080 ntBASIC14.34□□□□□ -0.11
RAE1P78406 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RAE1P78406 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAE1P78406 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.34□□□□□ -0.11
RAE1P78406 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAE1P78406 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAE1P78406 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms