Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
SPCS3P61009 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.45□□□□□ -0.42
SPCS3P61009 BX640515.1-201ENST00000617215 977 ntBASIC12.45□□□□□ -0.42
SPCS3P61009 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SPCS3P61009 INTS4P1-203ENST00000641008 3683 ntBASIC12.45□□□□□ -0.42
SPCS3P61009 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
SPCS3P61009 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.45□□□□□ -0.42
SPCS3P61009 AC012508.2-201ENST00000567613 1472 ntBASIC12.45□□□□□ -0.42
SPCS3P61009 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SPCS3P61009 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
SPCS3P61009 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 MBLAC2-202ENST00000514906 1936 ntBASIC12.45□□□□□ -0.42
SPCS3P61009 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.45□□□□□ -0.42
SPCS3P61009 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 CICP16-201ENST00000502609 2813 ntBASIC12.44□□□□□ -0.42
SPCS3P61009 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SPCS3P61009 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 AC023274.1-201ENST00000418278 595 ntBASIC12.44□□□□□ -0.42
SPCS3P61009 MCCD1P2-201ENST00000423228 335 ntBASIC12.44□□□□□ -0.42
SPCS3P61009 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.44□□□□□ -0.42
SPCS3P61009 HIST3H2BA-201ENST00000436555 524 ntBASIC12.44□□□□□ -0.42
SPCS3P61009 TARDBPP1-201ENST00000442013 1203 ntBASIC12.44□□□□□ -0.42
SPCS3P61009 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.44□□□□□ -0.42
SPCS3P61009 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.44□□□□□ -0.42
SPCS3P61009 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
SPCS3P61009 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
SPCS3P61009 AC018529.1-201ENST00000613063 361 ntBASIC12.44□□□□□ -0.42
SPCS3P61009 C20orf181-201ENST00000623918 480 ntBASIC12.44□□□□□ -0.42
SPCS3P61009 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.44□□□□□ -0.42
SPCS3P61009 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SPCS3P61009 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPCS3P61009 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.43□□□□□ -0.42
SPCS3P61009 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms