Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLDN20P56880 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
CLDN20P56880 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 RPL13AP25-201ENST00000484130 612 ntBASIC13.97□□□□□ -0.17
CLDN20P56880 AC011495.1-201ENST00000498085 584 ntBASIC13.97□□□□□ -0.17
CLDN20P56880 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.97□□□□□ -0.17
CLDN20P56880 AC120045.2-201ENST00000567334 178 ntBASIC13.97□□□□□ -0.17
CLDN20P56880 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 AC133539.2-201ENST00000604757 467 ntBASIC13.97□□□□□ -0.17
CLDN20P56880 AC025181.2-201ENST00000606994 802 ntBASIC13.97□□□□□ -0.17
CLDN20P56880 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 IGHV3-72-202ENST00000621503 303 ntBASIC13.97□□□□□ -0.17
CLDN20P56880 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
CLDN20P56880 FLJ16779-201ENST00000612722 7638 ntBASIC13.97□□□□□ -0.17
CLDN20P56880 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 DRD5P1-201ENST00000456605 1438 ntBASIC13.97□□□□□ -0.17
CLDN20P56880 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 AJ011931.1-201ENST00000618749 2492 ntBASIC13.97□□□□□ -0.17
CLDN20P56880 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 BEND3P1-201ENST00000421591 1944 ntBASIC13.96□□□□□ -0.17
CLDN20P56880 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 C18orf15-201ENST00000623680 2534 ntBASIC13.96□□□□□ -0.17
CLDN20P56880 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN20P56880 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 AL512384.1-201ENST00000406683 331 ntBASIC13.96□□□□□ -0.17
CLDN20P56880 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 KRT17P7-201ENST00000451704 1104 ntBASIC13.96□□□□□ -0.17
CLDN20P56880 RN7SL837P-201ENST00000463010 287 ntBASIC13.96□□□□□ -0.17
CLDN20P56880 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDN20P56880 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 CR383656.12-201ENST00000549567 513 ntBASIC13.96□□□□□ -0.17
CLDN20P56880 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.96□□□□□ -0.17
CLDN20P56880 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 AC124283.3-201ENST00000570869 594 ntBASIC13.96□□□□□ -0.17
CLDN20P56880 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDN20P56880 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.96□□□□□ -0.17
CLDN20P56880 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN20P56880 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 AC117489.1-201ENST00000625169 3217 ntBASIC13.96□□□□□ -0.17
CLDN20P56880 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN20P56880 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CLDN20P56880 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN20P56880 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
CLDN20P56880 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN20P56880 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN20P56880 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.18
CLDN20P56880 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN20P56880 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.96□□□□□ -0.18
CLDN20P56880 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN20P56880 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.96□□□□□ -0.18
CLDN20P56880 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN20P56880 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN20P56880 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.96□□□□□ -0.18
CLDN20P56880 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms