Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATP1B3P54709 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATP1B3P54709 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.25□□□□□ -0.29
ATP1B3P54709 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ATP1B3P54709 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.25□□□□□ -0.29
ATP1B3P54709 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATP1B3P54709 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATP1B3P54709 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATP1B3P54709 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ATP1B3P54709 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ATP1B3P54709 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AC138969.3-201ENST00000546612 1459 ntBASIC13.24□□□□□ -0.29
ATP1B3P54709 AC138932.2-201ENST00000548268 1459 ntBASIC13.24□□□□□ -0.29
ATP1B3P54709 AC126755.4-201ENST00000549796 1459 ntBASIC13.24□□□□□ -0.29
ATP1B3P54709 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ATP1B3P54709 KRT18P13-201ENST00000400056 1290 ntBASIC13.24□□□□□ -0.29
ATP1B3P54709 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.24□□□□□ -0.29
ATP1B3P54709 DNAJB3-202ENST00000449667 1266 ntBASIC13.24□□□□□ -0.29
ATP1B3P54709 AC125807.1-201ENST00000483097 614 ntBASIC13.24□□□□□ -0.29
ATP1B3P54709 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AL512361.1-201ENST00000554200 418 ntBASIC13.24□□□□□ -0.29
ATP1B3P54709 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AC025181.2-201ENST00000606994 802 ntBASIC13.24□□□□□ -0.29
ATP1B3P54709 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
ATP1B3P54709 Z92544.3-201ENST00000624747 417 ntBASIC13.24□□□□□ -0.29
ATP1B3P54709 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.24□□□□□ -0.29
ATP1B3P54709 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.24□□□□□ -0.29
ATP1B3P54709 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
ATP1B3P54709 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.24□□□□□ -0.29
ATP1B3P54709 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.24□□□□□ -0.29
ATP1B3P54709 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATP1B3P54709 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
ATP1B3P54709 AL121723.1-201ENST00000445194 1519 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ATP1B3P54709 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms