Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.61■□□□□ 0.09
ATXN3P54252 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ATXN3P54252 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.61■□□□□ 0.09
ATXN3P54252 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 AC092506.1-202ENST00000401022 528 ntBASIC15.61■□□□□ 0.09
ATXN3P54252 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.61■□□□□ 0.09
ATXN3P54252 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 AP000812.2-201ENST00000538934 718 ntBASIC15.61■□□□□ 0.09
ATXN3P54252 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.61■□□□□ 0.09
ATXN3P54252 MIR3615-201ENST00000581999 87 ntBASIC15.61■□□□□ 0.09
ATXN3P54252 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.61■□□□□ 0.09
ATXN3P54252 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
ATXN3P54252 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.61■□□□□ 0.09
ATXN3P54252 AC026748.1-201ENST00000624349 3251 ntBASIC15.61■□□□□ 0.09
ATXN3P54252 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATXN3P54252 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
ATXN3P54252 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
ATXN3P54252 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
ATXN3P54252 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 BAATP1-201ENST00000412284 1225 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.6■□□□□ 0.09
ATXN3P54252 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 C2orf27AP3-201ENST00000434123 579 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 GOLGA2P4-201ENST00000441462 777 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 FTH1P14-201ENST00000482930 551 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.6■□□□□ 0.09
ATXN3P54252 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.6■□□□□ 0.09
ATXN3P54252 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.6■□□□□ 0.09
ATXN3P54252 RN7SL560P-201ENST00000577943 264 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.6■□□□□ 0.09
ATXN3P54252 AL391069.4-201ENST00000609583 481 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 AL354718.3-201ENST00000616414 581 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.6■□□□□ 0.09
ATXN3P54252 CR382287.1-201ENST00000623954 586 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.6■□□□□ 0.09
ATXN3P54252 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 AC134312.5-201ENST00000568031 1313 ntBASIC15.6■□□□□ 0.09
ATXN3P54252 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.6■□□□□ 0.09
ATXN3P54252 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.6■□□□□ 0.09
ATXN3P54252 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.6■□□□□ 0.09
ATXN3P54252 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.6■□□□□ 0.09
ATXN3P54252 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
ATXN3P54252 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATXN3P54252 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATXN3P54252 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.59■□□□□ 0.09
ATXN3P54252 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATXN3P54252 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ATXN3P54252 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATXN3P54252 AC091951.1-201ENST00000512854 2465 ntBASIC15.59■□□□□ 0.09
ATXN3P54252 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ATXN3P54252 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATXN3P54252 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATXN3P54252 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATXN3P54252 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.59■□□□□ 0.09
ATXN3P54252 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.59■□□□□ 0.09
ATXN3P54252 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms