Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.7■□□□□ 0.26
GPC3P51654 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.7■□□□□ 0.26
GPC3P51654 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GPC3P51654 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.7■□□□□ 0.26
GPC3P51654 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.7■□□□□ 0.26
GPC3P51654 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.7■□□□□ 0.26
GPC3P51654 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.7■□□□□ 0.26
GPC3P51654 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 AP006547.1-201ENST00000563435 692 ntBASIC16.7■□□□□ 0.26
GPC3P51654 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.7■□□□□ 0.26
GPC3P51654 EEF1DP1-201ENST00000585891 896 ntBASIC16.7■□□□□ 0.26
GPC3P51654 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GPC3P51654 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 AC004466.1-201ENST00000599515 1080 ntBASIC16.7■□□□□ 0.26
GPC3P51654 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GPC3P51654 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.7■□□□□ 0.26
GPC3P51654 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC3P51654 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC3P51654 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GPC3P51654 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
GPC3P51654 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC3P51654 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 TCAF2P1-201ENST00000291129 2421 ntBASIC16.69■□□□□ 0.26
GPC3P51654 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GPC3P51654 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC3P51654 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 AL596257.1-201ENST00000641463 2694 ntBASIC16.69■□□□□ 0.26
GPC3P51654 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC3P51654 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.69■□□□□ 0.26
GPC3P51654 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.69■□□□□ 0.26
GPC3P51654 AC020907.1-201ENST00000616460 1350 ntBASIC16.69■□□□□ 0.26
GPC3P51654 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC3P51654 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GPC3P51654 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.69■□□□□ 0.26
GPC3P51654 AP003171.2-201ENST00000528208 925 ntBASIC16.69■□□□□ 0.26
GPC3P51654 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.69■□□□□ 0.26
GPC3P51654 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.69■□□□□ 0.26
GPC3P51654 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.69■□□□□ 0.26
GPC3P51654 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.69■□□□□ 0.26
GPC3P51654 MIR6787-201ENST00000616675 61 ntBASIC16.69■□□□□ 0.26
GPC3P51654 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.69■□□□□ 0.26
GPC3P51654 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.69■□□□□ 0.26
GPC3P51654 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GPC3P51654 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GPC3P51654 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.69■□□□□ 0.26
GPC3P51654 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 DBET-201ENST00000630918 3363 ntBASIC16.69■□□□□ 0.26
GPC3P51654 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC3P51654 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC3P51654 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
GPC3P51654 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GPC3P51654 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.68■□□□□ 0.26
GPC3P51654 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms