Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MMP13P45452 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
MMP13P45452 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.81■□□□□ 0.12
MMP13P45452 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MMP13P45452 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.81■□□□□ 0.12
MMP13P45452 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP13P45452 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.81■□□□□ 0.12
MMP13P45452 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP13P45452 TERF1P3-201ENST00000505638 1227 ntBASIC15.81■□□□□ 0.12
MMP13P45452 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.81■□□□□ 0.12
MMP13P45452 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP13P45452 AC092364.2-202ENST00000597012 1073 ntBASIC15.81■□□□□ 0.12
MMP13P45452 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.81■□□□□ 0.12
MMP13P45452 AC099568.2-201ENST00000609194 695 ntBASIC15.81■□□□□ 0.12
MMP13P45452 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP13P45452 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
MMP13P45452 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.81■□□□□ 0.12
MMP13P45452 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.81■□□□□ 0.12
MMP13P45452 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
MMP13P45452 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MMP13P45452 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP13P45452 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP13P45452 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP13P45452 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 AC113367.3-201ENST00000508316 1912 ntBASIC15.8■□□□□ 0.12
MMP13P45452 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MMP13P45452 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP13P45452 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 AL391825.1-201ENST00000457671 1364 ntBASIC15.8■□□□□ 0.12
MMP13P45452 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.8■□□□□ 0.12
MMP13P45452 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.8■□□□□ 0.12
MMP13P45452 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MMP13P45452 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP13P45452 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
MMP13P45452 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP13P45452 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP13P45452 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.8■□□□□ 0.12
MMP13P45452 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MMP13P45452 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MMP13P45452 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP13P45452 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
MMP13P45452 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP13P45452 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP13P45452 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MMP13P45452 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP13P45452 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP13P45452 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP13P45452 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP13P45452 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 AC087499.6-201ENST00000411576 835 ntBASIC15.79■□□□□ 0.12
MMP13P45452 PIN1P1-201ENST00000412108 996 ntBASIC15.79■□□□□ 0.12
MMP13P45452 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MMP13P45452 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP13P45452 AC104596.2-201ENST00000512793 793 ntBASIC15.79■□□□□ 0.12
MMP13P45452 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP13P45452 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP13P45452 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms