Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 CU639417.3-201ENST00000624240 1404 ntBASIC13.73□□□□□ -0.21
APOBEC1P41238 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBEC1P41238 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 AC097376.2-205ENST00000610159 5334 ntBASIC13.72□□□□□ -0.21
APOBEC1P41238 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 AC134312.5-201ENST00000568031 1313 ntBASIC13.72□□□□□ -0.21
APOBEC1P41238 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBEC1P41238 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
APOBEC1P41238 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
APOBEC1P41238 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.72□□□□□ -0.21
APOBEC1P41238 AC012441.1-201ENST00000446669 685 ntBASIC13.72□□□□□ -0.21
APOBEC1P41238 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBEC1P41238 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.72□□□□□ -0.21
APOBEC1P41238 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.72□□□□□ -0.21
APOBEC1P41238 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.72□□□□□ -0.21
APOBEC1P41238 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOBEC1P41238 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBEC1P41238 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBEC1P41238 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBEC1P41238 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC1P41238 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC1P41238 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.71□□□□□ -0.21
APOBEC1P41238 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC1P41238 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC1P41238 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC1P41238 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
APOBEC1P41238 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
APOBEC1P41238 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.71□□□□□ -0.21
APOBEC1P41238 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.71□□□□□ -0.21
APOBEC1P41238 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 AC068587.3-201ENST00000526613 355 ntBASIC13.71□□□□□ -0.21
APOBEC1P41238 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.71□□□□□ -0.21
APOBEC1P41238 MIR5189-201ENST00000577370 114 ntBASIC13.71□□□□□ -0.21
APOBEC1P41238 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC1P41238 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC1P41238 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
APOBEC1P41238 AC015936.2-201ENST00000593177 259 ntBASIC13.71□□□□□ -0.21
APOBEC1P41238 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC1P41238 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC1P41238 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC1P41238 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms