Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRPHP41219 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PRPHP41219 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PRPHP41219 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRPHP41219 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 FAM45BP-202ENST00000592932 1624 ntBASIC17.11■□□□□ 0.33
PRPHP41219 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRPHP41219 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.11■□□□□ 0.33
PRPHP41219 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 AC055811.4-201ENST00000624039 1754 ntBASIC17.11■□□□□ 0.33
PRPHP41219 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRPHP41219 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRPHP41219 AC012441.1-201ENST00000446669 685 ntBASIC17.11■□□□□ 0.33
PRPHP41219 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.11■□□□□ 0.33
PRPHP41219 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.11■□□□□ 0.33
PRPHP41219 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.11■□□□□ 0.33
PRPHP41219 MIR5189-201ENST00000577370 114 ntBASIC17.11■□□□□ 0.33
PRPHP41219 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.11■□□□□ 0.33
PRPHP41219 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.11■□□□□ 0.33
PRPHP41219 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.11■□□□□ 0.33
PRPHP41219 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.11■□□□□ 0.33
PRPHP41219 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 AC018665.1-201ENST00000622927 1362 ntBASIC17.11■□□□□ 0.33
PRPHP41219 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRPHP41219 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 LRRC59-203ENST00000576448 1531 ntBASIC17.11■□□□□ 0.33
PRPHP41219 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRPHP41219 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.1■□□□□ 0.33
PRPHP41219 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 OR2I1P-209ENST00000641730 5365 ntBASIC17.1■□□□□ 0.33
PRPHP41219 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.1■□□□□ 0.33
PRPHP41219 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PRPHP41219 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PRPHP41219 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PRPHP41219 BAATP1-201ENST00000412284 1225 ntBASIC17.1■□□□□ 0.33
PRPHP41219 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.1■□□□□ 0.33
PRPHP41219 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.1■□□□□ 0.33
PRPHP41219 AC026434.2-201ENST00000506094 1078 ntBASIC17.1■□□□□ 0.33
PRPHP41219 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PRPHP41219 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.1■□□□□ 0.33
PRPHP41219 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PRPHP41219 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PRPHP41219 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.1■□□□□ 0.33
PRPHP41219 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.1■□□□□ 0.33
PRPHP41219 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.1■□□□□ 0.33
PRPHP41219 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PRPHP41219 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.1■□□□□ 0.33
PRPHP41219 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PRPHP41219 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.1■□□□□ 0.33
PRPHP41219 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 AC007292.2-201ENST00000593524 1812 ntBASIC17.1■□□□□ 0.33
PRPHP41219 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRPHP41219 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms