Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PIN1P1-201ENST00000412108 996 ntBASIC15.4■□□□□ 0.06
HADHAP40939 AL442647.2-201ENST00000429864 857 ntBASIC15.4■□□□□ 0.06
HADHAP40939 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.4■□□□□ 0.06
HADHAP40939 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.4■□□□□ 0.06
HADHAP40939 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.4■□□□□ 0.06
HADHAP40939 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.4■□□□□ 0.06
HADHAP40939 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 SAMD11P1-201ENST00000571429 661 ntBASIC15.4■□□□□ 0.06
HADHAP40939 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.4■□□□□ 0.06
HADHAP40939 AC093813.1-201ENST00000605066 256 ntBASIC15.4■□□□□ 0.06
HADHAP40939 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 CICP14-201ENST00000629111 2732 ntBASIC15.4■□□□□ 0.06
HADHAP40939 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 AC023908.3-201ENST00000564211 3047 ntBASIC15.4■□□□□ 0.06
HADHAP40939 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HADHAP40939 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HADHAP40939 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HADHAP40939 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.39■□□□□ 0.05
HADHAP40939 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HADHAP40939 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.39■□□□□ 0.05
HADHAP40939 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 AC134915.1-201ENST00000426461 574 ntBASIC15.39■□□□□ 0.05
HADHAP40939 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.39■□□□□ 0.05
HADHAP40939 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.39■□□□□ 0.05
HADHAP40939 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 AC123567.1-201ENST00000548294 1261 ntBASIC15.39■□□□□ 0.05
HADHAP40939 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.39■□□□□ 0.05
HADHAP40939 AC107373.2-201ENST00000607735 490 ntBASIC15.39■□□□□ 0.05
HADHAP40939 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.39■□□□□ 0.05
HADHAP40939 AL662799.1-202ENST00000614205 422 ntBASIC15.39■□□□□ 0.05
HADHAP40939 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HADHAP40939 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HADHAP40939 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HADHAP40939 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HADHAP40939 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.38■□□□□ 0.05
HADHAP40939 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 INTS4P2-202ENST00000614726 2019 ntBASIC15.38■□□□□ 0.05
HADHAP40939 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HADHAP40939 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 MIR661-201ENST00000384842 89 ntBASIC15.38■□□□□ 0.05
HADHAP40939 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.38■□□□□ 0.05
HADHAP40939 VDAC1P7-201ENST00000462417 847 ntBASIC15.38■□□□□ 0.05
HADHAP40939 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms