Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.64■□□□□ 0.25
USP8P40818 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
USP8P40818 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
USP8P40818 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
USP8P40818 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
USP8P40818 AL589987.1-201ENST00000453380 819 ntBASIC16.64■□□□□ 0.25
USP8P40818 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.64■□□□□ 0.25
USP8P40818 SPDYE18-201ENST00000510091 1050 ntBASIC16.64■□□□□ 0.25
USP8P40818 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.64■□□□□ 0.25
USP8P40818 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.64■□□□□ 0.25
USP8P40818 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.64■□□□□ 0.25
USP8P40818 AC004840.1-201ENST00000636359 365 ntBASIC16.64■□□□□ 0.25
USP8P40818 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
USP8P40818 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
USP8P40818 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
USP8P40818 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP8P40818 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.64■□□□□ 0.25
USP8P40818 AC079781.5-202ENST00000641784 3743 ntBASIC16.63■□□□□ 0.25
USP8P40818 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.63■□□□□ 0.25
USP8P40818 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.63■□□□□ 0.25
USP8P40818 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
USP8P40818 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
USP8P40818 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.63■□□□□ 0.25
USP8P40818 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.63■□□□□ 0.25
USP8P40818 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.63■□□□□ 0.25
USP8P40818 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.63■□□□□ 0.25
USP8P40818 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.63■□□□□ 0.25
USP8P40818 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.63■□□□□ 0.25
USP8P40818 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.63■□□□□ 0.25
USP8P40818 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.63■□□□□ 0.25
USP8P40818 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.63■□□□□ 0.25
USP8P40818 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
USP8P40818 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.63■□□□□ 0.25
USP8P40818 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
USP8P40818 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.63■□□□□ 0.25
USP8P40818 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.63■□□□□ 0.25
USP8P40818 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.63■□□□□ 0.25
USP8P40818 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP8P40818 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 BTBD7P1-201ENST00000447253 1453 ntBASIC16.62■□□□□ 0.25
USP8P40818 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.62■□□□□ 0.25
USP8P40818 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 MEIS3P1-201ENST00000495167 958 ntBASIC16.62■□□□□ 0.25
USP8P40818 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
USP8P40818 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.62■□□□□ 0.25
USP8P40818 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.62■□□□□ 0.25
USP8P40818 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
USP8P40818 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.62■□□□□ 0.25
USP8P40818 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP8P40818 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.62■□□□□ 0.25
USP8P40818 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms