Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 AC105339.3-201ENST00000560043 636 ntBASIC11.23□□□□□ -0.61
CKS2P33552 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.23□□□□□ -0.61
CKS2P33552 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
CKS2P33552 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.23□□□□□ -0.61
CKS2P33552 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CKS2P33552 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
CKS2P33552 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CKS2P33552 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.23□□□□□ -0.61
CKS2P33552 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CKS2P33552 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 AL136982.4-201ENST00000437689 1740 ntBASIC11.23□□□□□ -0.61
CKS2P33552 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CKS2P33552 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.23□□□□□ -0.61
CKS2P33552 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CKS2P33552 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS2P33552 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS2P33552 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS2P33552 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS2P33552 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS2P33552 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.22□□□□□ -0.61
CKS2P33552 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS2P33552 AC073648.2-201ENST00000510116 352 ntBASIC11.22□□□□□ -0.61
CKS2P33552 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 HNRNPUP1-201ENST00000554987 333 ntBASIC11.22□□□□□ -0.61
CKS2P33552 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS2P33552 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS2P33552 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS2P33552 AC012508.2-201ENST00000567613 1472 ntBASIC11.22□□□□□ -0.61
CKS2P33552 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.22□□□□□ -0.61
CKS2P33552 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS2P33552 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
CKS2P33552 AC008735.5-201ENST00000623544 497 ntBASIC11.22□□□□□ -0.61
CKS2P33552 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS2P33552 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS2P33552 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms