Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PTPN6P29350 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.42□□□□□ -0.1
PTPN6P29350 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PTPN6P29350 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 AC015802.1-201ENST00000588104 1449 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.41□□□□□ -0.1
PTPN6P29350 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.41□□□□□ -0.1
PTPN6P29350 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.41□□□□□ -0.1
PTPN6P29350 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PTPN6P29350 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 CRB3P1-201ENST00000449338 276 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 COX20P2-201ENST00000452636 358 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 AL589987.1-201ENST00000453380 819 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.41□□□□□ -0.1
PTPN6P29350 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 TIMM17BP1-201ENST00000545713 516 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
PTPN6P29350 AC190387.1-201ENST00000551683 408 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 AL132655.2-201ENST00000596276 594 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PTPN6P29350 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 AC136759.1-202ENST00000530858 2194 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.41□□□□□ -0.1
PTPN6P29350 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.41□□□□□ -0.1
PTPN6P29350 AL161772.1-201ENST00000610494 4412 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 AC117489.1-201ENST00000625169 3217 ntBASIC14.41□□□□□ -0.1
PTPN6P29350 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PTPN6P29350 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PTPN6P29350 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTPN6P29350 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PTPN6P29350 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 INTS4P1-203ENST00000641008 3683 ntBASIC14.4□□□□□ -0.1
PTPN6P29350 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 AC007541.1-201ENST00000570282 1469 ntBASIC14.4□□□□□ -0.1
PTPN6P29350 AC006504.5-208ENST00000588784 2401 ntBASIC14.4□□□□□ -0.1
PTPN6P29350 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PTPN6P29350 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.4□□□□□ -0.1
PTPN6P29350 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
PTPN6P29350 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.4□□□□□ -0.1
PTPN6P29350 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.4□□□□□ -0.1
PTPN6P29350 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.4□□□□□ -0.1
PTPN6P29350 AC093004.1-201ENST00000508850 424 ntBASIC14.4□□□□□ -0.1
PTPN6P29350 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.4□□□□□ -0.1
PTPN6P29350 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.4□□□□□ -0.1
PTPN6P29350 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.4□□□□□ -0.1
PTPN6P29350 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PTPN6P29350 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms