Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 CLUHP2-201ENST00000426660 1303 ntBASIC13.06□□□□□ -0.32
CD40P25942 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CD40P25942 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.06□□□□□ -0.32
CD40P25942 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CD40P25942 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CD40P25942 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.05□□□□□ -0.32
CD40P25942 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CD40P25942 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 GOLGA2P4-201ENST00000441462 777 ntBASIC13.05□□□□□ -0.32
CD40P25942 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 MESTP3-201ENST00000503460 968 ntBASIC13.05□□□□□ -0.32
CD40P25942 AL391280.1-201ENST00000506969 1062 ntBASIC13.05□□□□□ -0.32
CD40P25942 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.05□□□□□ -0.32
CD40P25942 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.05□□□□□ -0.32
CD40P25942 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 AC106820.3-201ENST00000561653 397 ntBASIC13.05□□□□□ -0.32
CD40P25942 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.05□□□□□ -0.32
CD40P25942 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
CD40P25942 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.05□□□□□ -0.32
CD40P25942 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD40P25942 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CD40P25942 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
CD40P25942 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.04□□□□□ -0.32
CD40P25942 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.04□□□□□ -0.32
CD40P25942 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 AP000845.1-201ENST00000581677 2131 ntBASIC13.04□□□□□ -0.32
CD40P25942 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CD40P25942 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms