Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PPT1-215ENST00000641471 2368 ntBASIC17.57■□□□□ 0.4
ERCC3P19447 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ERCC3P19447 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 MIR663B-201ENST00000408361 115 ntBASIC17.57■□□□□ 0.4
ERCC3P19447 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.57■□□□□ 0.4
ERCC3P19447 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.57■□□□□ 0.4
ERCC3P19447 FNTAP2-201ENST00000430308 634 ntBASIC17.57■□□□□ 0.4
ERCC3P19447 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.57■□□□□ 0.4
ERCC3P19447 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 AC091804.1-201ENST00000486888 567 ntBASIC17.57■□□□□ 0.4
ERCC3P19447 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC3P19447 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC3P19447 RHOQP1-201ENST00000555758 579 ntBASIC17.57■□□□□ 0.4
ERCC3P19447 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC3P19447 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC3P19447 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
ERCC3P19447 AL023775.1-201ENST00000454907 1746 ntBASIC17.57■□□□□ 0.4
ERCC3P19447 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC3P19447 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ERCC3P19447 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ERCC3P19447 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 AC138028.6-201ENST00000616106 1482 ntBASIC17.56■□□□□ 0.4
ERCC3P19447 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ERCC3P19447 KRT8P14-201ENST00000414254 1442 ntBASIC17.56■□□□□ 0.4
ERCC3P19447 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
ERCC3P19447 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 AL645937.2-201ENST00000396808 931 ntBASIC17.56■□□□□ 0.4
ERCC3P19447 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.56■□□□□ 0.4
ERCC3P19447 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 HSPB1P2-201ENST00000448722 546 ntBASIC17.56■□□□□ 0.4
ERCC3P19447 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 SCARNA20.5-201ENST00000516991 142 ntBASIC17.56■□□□□ 0.4
ERCC3P19447 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.56■□□□□ 0.4
ERCC3P19447 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.56■□□□□ 0.4
ERCC3P19447 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.56■□□□□ 0.4
ERCC3P19447 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.56■□□□□ 0.4
ERCC3P19447 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ERCC3P19447 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
ERCC3P19447 AC084364.1-201ENST00000551967 1556 ntBASIC17.56■□□□□ 0.4
ERCC3P19447 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ERCC3P19447 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC3P19447 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC3P19447 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ERCC3P19447 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ERCC3P19447 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.55■□□□□ 0.4
ERCC3P19447 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.55■□□□□ 0.4
ERCC3P19447 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC3P19447 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.55■□□□□ 0.4
ERCC3P19447 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC3P19447 BX284668.4-201ENST00000453917 508 ntBASIC17.55■□□□□ 0.4
ERCC3P19447 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.55■□□□□ 0.4
ERCC3P19447 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ERCC3P19447 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC3P19447 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms