Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CD53P19397 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 MYCLP2-201ENST00000449268 967 ntBASIC13.87□□□□□ -0.19
CD53P19397 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 SDHAP3-202ENST00000515467 728 ntBASIC13.87□□□□□ -0.19
CD53P19397 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.87□□□□□ -0.19
CD53P19397 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD53P19397 TPRX2P-201ENST00000535362 881 ntBASIC13.87□□□□□ -0.19
CD53P19397 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.87□□□□□ -0.19
CD53P19397 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.87□□□□□ -0.19
CD53P19397 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.87□□□□□ -0.19
CD53P19397 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.87□□□□□ -0.19
CD53P19397 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD53P19397 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.87□□□□□ -0.19
CD53P19397 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.87□□□□□ -0.19
CD53P19397 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
CD53P19397 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.86□□□□□ -0.19
CD53P19397 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.86□□□□□ -0.19
CD53P19397 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.86□□□□□ -0.19
CD53P19397 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 BEND3P1-201ENST00000421591 1944 ntBASIC13.86□□□□□ -0.19
CD53P19397 KRT8P12-202ENST00000472924 1397 ntBASIC13.86□□□□□ -0.19
CD53P19397 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.86□□□□□ -0.19
CD53P19397 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.86□□□□□ -0.19
CD53P19397 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD53P19397 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.86□□□□□ -0.19
CD53P19397 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.86□□□□□ -0.19
CD53P19397 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.86□□□□□ -0.19
CD53P19397 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CD53P19397 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.86□□□□□ -0.19
CD53P19397 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
CD53P19397 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 AL512343.1-201ENST00000605837 169 ntBASIC13.86□□□□□ -0.19
CD53P19397 AC099568.2-201ENST00000609194 695 ntBASIC13.86□□□□□ -0.19
CD53P19397 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.86□□□□□ -0.19
CD53P19397 AC004461.2-201ENST00000629517 803 ntBASIC13.86□□□□□ -0.19
CD53P19397 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.86□□□□□ -0.19
CD53P19397 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CD53P19397 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD53P19397 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CD53P19397 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.86□□□□□ -0.19
CD53P19397 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CD53P19397 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.86□□□□□ -0.19
CD53P19397 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.86□□□□□ -0.19
CD53P19397 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD53P19397 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 ACE3P-201ENST00000423435 1973 ntBASIC13.85□□□□□ -0.19
CD53P19397 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.85□□□□□ -0.19
CD53P19397 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.85□□□□□ -0.19
CD53P19397 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.85□□□□□ -0.19
CD53P19397 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CD53P19397 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 KRT8P37-201ENST00000451609 1420 ntBASIC13.85□□□□□ -0.19
CD53P19397 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.85□□□□□ -0.19
CD53P19397 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms