Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 BX088702.1-201ENST00000610784 235 ntBASIC16.67■□□□□ 0.26
SMPD1P17405 AC027601.3-201ENST00000622907 509 ntBASIC16.67■□□□□ 0.26
SMPD1P17405 Z99916.3-201ENST00000623422 1080 ntBASIC16.67■□□□□ 0.26
SMPD1P17405 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.67■□□□□ 0.26
SMPD1P17405 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMPD1P17405 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMPD1P17405 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.67■□□□□ 0.26
SMPD1P17405 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.67■□□□□ 0.26
SMPD1P17405 AC092978.1-202ENST00000637590 1327 ntBASIC16.67■□□□□ 0.26
SMPD1P17405 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMPD1P17405 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMPD1P17405 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMPD1P17405 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SMPD1P17405 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.66■□□□□ 0.26
SMPD1P17405 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.66■□□□□ 0.26
SMPD1P17405 AL157407.1-201ENST00000435784 904 ntBASIC16.66■□□□□ 0.26
SMPD1P17405 LDHBP1-201ENST00000455730 1119 ntBASIC16.66■□□□□ 0.26
SMPD1P17405 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.66■□□□□ 0.26
SMPD1P17405 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.66■□□□□ 0.26
SMPD1P17405 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 MIR3147-201ENST00000577811 66 ntBASIC16.66■□□□□ 0.26
SMPD1P17405 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.66■□□□□ 0.26
SMPD1P17405 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.66■□□□□ 0.26
SMPD1P17405 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
SMPD1P17405 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.66■□□□□ 0.26
SMPD1P17405 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.66■□□□□ 0.26
SMPD1P17405 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMPD1P17405 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SMPD1P17405 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMPD1P17405 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.65■□□□□ 0.26
SMPD1P17405 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.65■□□□□ 0.26
SMPD1P17405 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SMPD1P17405 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SMPD1P17405 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 AC078875.1-201ENST00000431907 724 ntBASIC16.65■□□□□ 0.26
SMPD1P17405 AC253536.4-201ENST00000440539 267 ntBASIC16.65■□□□□ 0.26
SMPD1P17405 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.65■□□□□ 0.26
SMPD1P17405 GCOM2-201ENST00000509133 1104 ntBASIC16.65■□□□□ 0.26
SMPD1P17405 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.65■□□□□ 0.26
SMPD1P17405 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SMPD1P17405 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms