Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.13□□□□□ -0.15
UBL4AP11441 AL049840.4-201ENST00000602422 811 ntBASIC14.13□□□□□ -0.15
UBL4AP11441 AL096865.1-201ENST00000606796 927 ntBASIC14.13□□□□□ -0.15
UBL4AP11441 AC004233.3-201ENST00000607794 1269 ntBASIC14.13□□□□□ -0.15
UBL4AP11441 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
UBL4AP11441 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.13□□□□□ -0.15
UBL4AP11441 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.13□□□□□ -0.15
UBL4AP11441 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.13□□□□□ -0.15
UBL4AP11441 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
UBL4AP11441 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
UBL4AP11441 AC012508.2-201ENST00000567613 1472 ntBASIC14.12□□□□□ -0.15
UBL4AP11441 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBL4AP11441 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.12□□□□□ -0.15
UBL4AP11441 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBL4AP11441 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBL4AP11441 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
UBL4AP11441 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.12□□□□□ -0.15
UBL4AP11441 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBL4AP11441 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.12□□□□□ -0.15
UBL4AP11441 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBL4AP11441 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.12□□□□□ -0.15
UBL4AP11441 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 DFFBP1-201ENST00000433250 979 ntBASIC14.12□□□□□ -0.15
UBL4AP11441 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 FAM207CP-201ENST00000443486 507 ntBASIC14.12□□□□□ -0.15
UBL4AP11441 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.12□□□□□ -0.15
UBL4AP11441 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.12□□□□□ -0.15
UBL4AP11441 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.12□□□□□ -0.15
UBL4AP11441 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.12□□□□□ -0.15
UBL4AP11441 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.12□□□□□ -0.15
UBL4AP11441 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.12□□□□□ -0.15
UBL4AP11441 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.12□□□□□ -0.15
UBL4AP11441 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.12□□□□□ -0.15
UBL4AP11441 SPCS2P1-201ENST00000561636 679 ntBASIC14.12□□□□□ -0.15
UBL4AP11441 AL355385.1-201ENST00000606123 409 ntBASIC14.12□□□□□ -0.15
UBL4AP11441 AC099568.2-201ENST00000609194 695 ntBASIC14.12□□□□□ -0.15
UBL4AP11441 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 AC007292.2-201ENST00000593524 1812 ntBASIC14.12□□□□□ -0.15
UBL4AP11441 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.12□□□□□ -0.15
UBL4AP11441 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
UBL4AP11441 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBL4AP11441 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
UBL4AP11441 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBL4AP11441 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.12□□□□□ -0.15
UBL4AP11441 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 ZBED1P1-201ENST00000502364 1930 ntBASIC14.11□□□□□ -0.15
UBL4AP11441 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 SLC7A15P-201ENST00000424028 1363 ntBASIC14.11□□□□□ -0.15
UBL4AP11441 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms