Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TNFP01375 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFP01375 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFP01375 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TNFP01375 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
TNFP01375 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFP01375 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
TNFP01375 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 BCYRN1-201ENST00000418539 200 ntBASIC14.74□□□□□ -0.05
TNFP01375 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFP01375 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.74□□□□□ -0.05
TNFP01375 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFP01375 ZNF767P-206ENST00000513792 565 ntBASIC14.74□□□□□ -0.05
TNFP01375 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.74□□□□□ -0.05
TNFP01375 AC126915.1-201ENST00000522847 1038 ntBASIC14.74□□□□□ -0.05
TNFP01375 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFP01375 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFP01375 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFP01375 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFP01375 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFP01375 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFP01375 AC007663.3-201ENST00000609632 465 ntBASIC14.74□□□□□ -0.05
TNFP01375 AC002472.3-201ENST00000640124 621 ntBASIC14.74□□□□□ -0.05
TNFP01375 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TNFP01375 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
TNFP01375 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFP01375 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TNFP01375 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFP01375 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFP01375 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFP01375 AP000845.1-201ENST00000581677 2131 ntBASIC14.74□□□□□ -0.05
TNFP01375 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TNFP01375 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 RN7SKP175-201ENST00000408472 289 ntBASIC14.73□□□□□ -0.05
TNFP01375 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFP01375 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFP01375 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFP01375 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFP01375 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TNFP01375 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.73□□□□□ -0.05
TNFP01375 AC007950.2-201ENST00000615045 2347 ntBASIC14.73□□□□□ -0.05
TNFP01375 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 PCDHA3-202ENST00000532566 4594 ntBASIC14.73□□□□□ -0.05
TNFP01375 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFP01375 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TNFP01375 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFP01375 MROH4P-201ENST00000431302 1578 ntBASIC14.73□□□□□ -0.05
TNFP01375 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFP01375 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFP01375 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFP01375 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms