Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TIMP1P01033 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.1■□□□□ 0.17
TIMP1P01033 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.1■□□□□ 0.17
TIMP1P01033 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TIMP1P01033 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TIMP1P01033 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TIMP1P01033 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.1■□□□□ 0.17
TIMP1P01033 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TIMP1P01033 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TIMP1P01033 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.09■□□□□ 0.17
TIMP1P01033 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 CICP13-201ENST00000422015 2789 ntBASIC16.09■□□□□ 0.17
TIMP1P01033 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TIMP1P01033 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.09■□□□□ 0.17
TIMP1P01033 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 PSMD4P1-201ENST00000433951 1109 ntBASIC16.09■□□□□ 0.17
TIMP1P01033 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 AC024293.1-201ENST00000467930 498 ntBASIC16.09■□□□□ 0.17
TIMP1P01033 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.09■□□□□ 0.17
TIMP1P01033 AC084752.1-201ENST00000509766 622 ntBASIC16.09■□□□□ 0.17
TIMP1P01033 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.09■□□□□ 0.17
TIMP1P01033 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.09■□□□□ 0.17
TIMP1P01033 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.09■□□□□ 0.17
TIMP1P01033 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.09■□□□□ 0.17
TIMP1P01033 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TIMP1P01033 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.09■□□□□ 0.17
TIMP1P01033 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TIMP1P01033 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TIMP1P01033 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TIMP1P01033 MARK2P16-201ENST00000605714 1723 ntBASIC16.08■□□□□ 0.17
TIMP1P01033 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TIMP1P01033 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TIMP1P01033 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.08■□□□□ 0.17
TIMP1P01033 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.08■□□□□ 0.16
TIMP1P01033 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TIMP1P01033 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.08■□□□□ 0.16
TIMP1P01033 DUX4L50-201ENST00000455245 715 ntBASIC16.08■□□□□ 0.16
TIMP1P01033 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.08■□□□□ 0.16
TIMP1P01033 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.08■□□□□ 0.16
TIMP1P01033 DNM1P51-201ENST00000558149 522 ntBASIC16.08■□□□□ 0.16
TIMP1P01033 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.08■□□□□ 0.16
TIMP1P01033 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TIMP1P01033 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 LILRP1-201ENST00000444199 1370 ntBASIC16.08■□□□□ 0.16
TIMP1P01033 LINC01815-202ENST00000641468 1409 ntBASIC16.08■□□□□ 0.16
TIMP1P01033 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TIMP1P01033 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.08■□□□□ 0.16
TIMP1P01033 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TIMP1P01033 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.08■□□□□ 0.16
TIMP1P01033 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TIMP1P01033 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TIMP1P01033 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
TIMP1P01033 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TIMP1P01033 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 PCDHA14-201ENST00000506751 2298 ntBASIC16.07■□□□□ 0.16
TIMP1P01033 AC024909.3-201ENST00000611513 2257 ntBASIC16.07■□□□□ 0.16
TIMP1P01033 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.07■□□□□ 0.16
TIMP1P01033 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TIMP1P01033 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMP1P01033 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMP1P01033 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.07■□□□□ 0.16
TIMP1P01033 AC026410.1-201ENST00000507366 1101 ntBASIC16.07■□□□□ 0.16
TIMP1P01033 AC131206.1-201ENST00000538078 1211 ntBASIC16.07■□□□□ 0.16
TIMP1P01033 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.07■□□□□ 0.16
TIMP1P01033 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMP1P01033 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.07■□□□□ 0.16
TIMP1P01033 AC006158.1-201ENST00000610661 249 ntBASIC16.07■□□□□ 0.16
TIMP1P01033 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.07■□□□□ 0.16
TIMP1P01033 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms