Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17■□□□□ 0.31
ALDH1A1P00352 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17■□□□□ 0.31
ALDH1A1P00352 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17■□□□□ 0.31
ALDH1A1P00352 DUX4L50-201ENST00000455245 715 ntBASIC17■□□□□ 0.31
ALDH1A1P00352 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17■□□□□ 0.31
ALDH1A1P00352 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17■□□□□ 0.31
ALDH1A1P00352 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17■□□□□ 0.31
ALDH1A1P00352 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17■□□□□ 0.31
ALDH1A1P00352 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17■□□□□ 0.31
ALDH1A1P00352 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
ALDH1A1P00352 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
ALDH1A1P00352 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17■□□□□ 0.31
ALDH1A1P00352 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
ALDH1A1P00352 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ALDH1A1P00352 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17■□□□□ 0.31
ALDH1A1P00352 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
ALDH1A1P00352 ZBED1P1-201ENST00000502364 1930 ntBASIC17■□□□□ 0.31
ALDH1A1P00352 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 AC012508.2-201ENST00000567613 1472 ntBASIC16.99■□□□□ 0.31
ALDH1A1P00352 AC003102.2-201ENST00000589195 1469 ntBASIC16.99■□□□□ 0.31
ALDH1A1P00352 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 FAM86B3P-203ENST00000523992 854 ntBASIC16.99■□□□□ 0.31
ALDH1A1P00352 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.99■□□□□ 0.31
ALDH1A1P00352 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.99■□□□□ 0.31
ALDH1A1P00352 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALDH1A1P00352 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 GUSBP10-201ENST00000417412 665 ntBASIC16.98■□□□□ 0.31
ALDH1A1P00352 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 RPL35P9-201ENST00000446059 350 ntBASIC16.98■□□□□ 0.31
ALDH1A1P00352 RN7SL396P-201ENST00000471086 295 ntBASIC16.98■□□□□ 0.31
ALDH1A1P00352 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.98■□□□□ 0.31
ALDH1A1P00352 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALDH1A1P00352 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms