Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.03■□□□□ 0.48
MBD4O95243 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MBD4O95243 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.03■□□□□ 0.48
MBD4O95243 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MBD4O95243 AC011840.2-201ENST00000563063 1520 ntBASIC18.03■□□□□ 0.48
MBD4O95243 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.03■□□□□ 0.48
MBD4O95243 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
MBD4O95243 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.02■□□□□ 0.48
MBD4O95243 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.02■□□□□ 0.48
MBD4O95243 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.02■□□□□ 0.48
MBD4O95243 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 FAM86HP-204ENST00000513466 959 ntBASIC18.02■□□□□ 0.48
MBD4O95243 PPY2P-201ENST00000582808 702 ntBASIC18.02■□□□□ 0.48
MBD4O95243 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.02■□□□□ 0.48
MBD4O95243 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.02■□□□□ 0.48
MBD4O95243 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.02■□□□□ 0.48
MBD4O95243 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.02■□□□□ 0.48
MBD4O95243 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.02■□□□□ 0.48
MBD4O95243 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD4O95243 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
MBD4O95243 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
MBD4O95243 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.02■□□□□ 0.47
MBD4O95243 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MBD4O95243 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MBD4O95243 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.02■□□□□ 0.47
MBD4O95243 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MBD4O95243 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.02■□□□□ 0.47
MBD4O95243 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 KRT8P4-201ENST00000509735 1454 ntBASIC18.01■□□□□ 0.47
MBD4O95243 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
MBD4O95243 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 AC020910.5-201ENST00000623668 1865 ntBASIC18.01■□□□□ 0.47
MBD4O95243 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.01■□□□□ 0.47
MBD4O95243 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
MBD4O95243 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.01■□□□□ 0.47
MBD4O95243 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 RN7SKP230-201ENST00000365642 335 ntBASIC18.01■□□□□ 0.47
MBD4O95243 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.01■□□□□ 0.47
MBD4O95243 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.01■□□□□ 0.47
MBD4O95243 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.01■□□□□ 0.47
MBD4O95243 HOMER2P2-201ENST00000451621 847 ntBASIC18.01■□□□□ 0.47
MBD4O95243 AC092658.1-201ENST00000505836 891 ntBASIC18.01■□□□□ 0.47
MBD4O95243 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.01■□□□□ 0.47
MBD4O95243 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.01■□□□□ 0.47
MBD4O95243 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.01■□□□□ 0.47
MBD4O95243 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.01■□□□□ 0.47
MBD4O95243 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.01■□□□□ 0.47
MBD4O95243 AC138696.2-201ENST00000607376 223 ntBASIC18.01■□□□□ 0.47
MBD4O95243 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.01■□□□□ 0.47
MBD4O95243 AC009093.2-202ENST00000620513 2079 ntBASIC18.01■□□□□ 0.47
MBD4O95243 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
MBD4O95243 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
MBD4O95243 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD4O95243 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18■□□□□ 0.47
MBD4O95243 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18■□□□□ 0.47
MBD4O95243 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MBD4O95243 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
MBD4O95243 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 FAM86MP-201ENST00000340703 885 ntBASIC18■□□□□ 0.47
MBD4O95243 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18■□□□□ 0.47
MBD4O95243 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD4O95243 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18■□□□□ 0.47
MBD4O95243 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms