Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CSF2RBP1-201ENST00000447905 391 ntBASIC16.03■□□□□ 0.16
RTN3O95197 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.03■□□□□ 0.16
RTN3O95197 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.03■□□□□ 0.16
RTN3O95197 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.03■□□□□ 0.16
RTN3O95197 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 AC005252.3-201ENST00000623855 2258 ntBASIC16.03■□□□□ 0.16
RTN3O95197 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.02■□□□□ 0.16
RTN3O95197 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.02■□□□□ 0.16
RTN3O95197 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RTN3O95197 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.02■□□□□ 0.16
RTN3O95197 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.02■□□□□ 0.16
RTN3O95197 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.02■□□□□ 0.16
RTN3O95197 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RTN3O95197 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RTN3O95197 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.02■□□□□ 0.16
RTN3O95197 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.02■□□□□ 0.16
RTN3O95197 AC099336.1-201ENST00000417053 1171 ntBASIC16.02■□□□□ 0.16
RTN3O95197 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTN3O95197 AC007274.1-201ENST00000439805 662 ntBASIC16.02■□□□□ 0.16
RTN3O95197 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.02■□□□□ 0.16
RTN3O95197 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
RTN3O95197 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RTN3O95197 RNA5SP486-201ENST00000515961 83 ntBASIC16.02■□□□□ 0.16
RTN3O95197 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RTN3O95197 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.02■□□□□ 0.16
RTN3O95197 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RTN3O95197 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RTN3O95197 CICP11-201ENST00000434745 2827 ntBASIC16.02■□□□□ 0.15
RTN3O95197 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTN3O95197 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RTN3O95197 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
RTN3O95197 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.02■□□□□ 0.15
RTN3O95197 AC005089.1-201ENST00000619486 2241 ntBASIC16.02■□□□□ 0.15
RTN3O95197 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
RTN3O95197 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTN3O95197 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RTN3O95197 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RTN3O95197 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RTN3O95197 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.01■□□□□ 0.15
RTN3O95197 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.01■□□□□ 0.15
RTN3O95197 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.01■□□□□ 0.15
RTN3O95197 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RTN3O95197 AC006001.1-201ENST00000325130 474 ntBASIC16.01■□□□□ 0.15
RTN3O95197 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 HLA-V-201ENST00000429037 534 ntBASIC16.01■□□□□ 0.15
RTN3O95197 FAM197Y7-201ENST00000432892 766 ntBASIC16.01■□□□□ 0.15
RTN3O95197 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.01■□□□□ 0.15
RTN3O95197 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.01■□□□□ 0.15
RTN3O95197 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTN3O95197 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.01■□□□□ 0.15
RTN3O95197 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.01■□□□□ 0.15
RTN3O95197 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.01■□□□□ 0.15
RTN3O95197 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.01■□□□□ 0.15
RTN3O95197 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.01■□□□□ 0.15
RTN3O95197 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RTN3O95197 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.01■□□□□ 0.15
RTN3O95197 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RTN3O95197 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RTN3O95197 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RTN3O95197 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RTN3O95197 AC012508.2-201ENST00000567613 1472 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms