Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LTN1O94822 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.56■□□□□ 0.72
LTN1O94822 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LTN1O94822 AC009093.10-201ENST00000641956 1442 ntBASIC19.56■□□□□ 0.72
LTN1O94822 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LTN1O94822 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.56■□□□□ 0.72
LTN1O94822 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LTN1O94822 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LTN1O94822 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LTN1O94822 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LTN1O94822 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LTN1O94822 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LTN1O94822 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LTN1O94822 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.55■□□□□ 0.72
LTN1O94822 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LTN1O94822 RPL13AP19-201ENST00000434320 584 ntBASIC19.55■□□□□ 0.72
LTN1O94822 AC093752.3-201ENST00000567343 901 ntBASIC19.55■□□□□ 0.72
LTN1O94822 LINC01783-202ENST00000614408 828 ntBASIC19.55■□□□□ 0.72
LTN1O94822 BX284668.2-205ENST00000619677 828 ntBASIC19.55■□□□□ 0.72
LTN1O94822 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.55■□□□□ 0.72
LTN1O94822 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.55■□□□□ 0.72
LTN1O94822 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LTN1O94822 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LTN1O94822 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LTN1O94822 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LTN1O94822 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LTN1O94822 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
LTN1O94822 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LTN1O94822 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LTN1O94822 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.55■□□□□ 0.72
LTN1O94822 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
LTN1O94822 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 AC114947.1-202ENST00000514136 344 ntBASIC19.55■□□□□ 0.72
LTN1O94822 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LTN1O94822 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.54■□□□□ 0.72
LTN1O94822 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LTN1O94822 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.54■□□□□ 0.72
LTN1O94822 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.54■□□□□ 0.72
LTN1O94822 AL162727.3-201ENST00000635661 2787 ntBASIC19.54■□□□□ 0.72
LTN1O94822 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.54■□□□□ 0.72
LTN1O94822 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC19.54■□□□□ 0.72
LTN1O94822 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
LTN1O94822 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC19.54■□□□□ 0.72
LTN1O94822 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.54■□□□□ 0.72
LTN1O94822 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.54■□□□□ 0.72
LTN1O94822 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.54■□□□□ 0.72
LTN1O94822 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.54■□□□□ 0.72
LTN1O94822 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.54■□□□□ 0.72
LTN1O94822 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC19.54■□□□□ 0.72
LTN1O94822 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.54■□□□□ 0.72
LTN1O94822 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.54■□□□□ 0.72
LTN1O94822 AC090502.4-201ENST00000551714 1386 ntBASIC19.54■□□□□ 0.72
LTN1O94822 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTN1O94822 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.53■□□□□ 0.72
LTN1O94822 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LTN1O94822 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.53■□□□□ 0.72
LTN1O94822 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LTN1O94822 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.53■□□□□ 0.72
LTN1O94822 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LTN1O94822 AL357563.1-201ENST00000404728 395 ntBASIC19.53■□□□□ 0.72
LTN1O94822 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19.53■□□□□ 0.72
LTN1O94822 MIR6769A-201ENST00000617340 73 ntBASIC19.53■□□□□ 0.72
LTN1O94822 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC19.53■□□□□ 0.72
LTN1O94822 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms