Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.95□□□□□ -0.66
PAX4O43316 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC10.95□□□□□ -0.66
PAX4O43316 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
PAX4O43316 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
PAX4O43316 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.95□□□□□ -0.66
PAX4O43316 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.95□□□□□ -0.66
PAX4O43316 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC10.95□□□□□ -0.66
PAX4O43316 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.95□□□□□ -0.66
PAX4O43316 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC10.95□□□□□ -0.66
PAX4O43316 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
PAX4O43316 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.95□□□□□ -0.66
PAX4O43316 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
PAX4O43316 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 GSN-206ENST00000394353 2311 ntTSL 2 BASIC10.95□□□□□ -0.66
PAX4O43316 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PAX4O43316 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.95□□□□□ -0.66
PAX4O43316 AMT-224ENST00000635808 1610 ntTSL 5 BASIC10.95□□□□□ -0.66
PAX4O43316 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 AP000568.1-201ENST00000282964 442 ntBASIC10.94□□□□□ -0.66
PAX4O43316 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 MRPS18AP1-201ENST00000414458 589 ntBASIC10.94□□□□□ -0.66
PAX4O43316 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 WDR53-203ENST00000429115 683 ntTSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.94□□□□□ -0.66
PAX4O43316 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 AC104596.2-201ENST00000512793 793 ntBASIC10.94□□□□□ -0.66
PAX4O43316 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC10.94□□□□□ -0.66
PAX4O43316 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.94□□□□□ -0.66
PAX4O43316 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 AL096865.1-201ENST00000606796 927 ntBASIC10.94□□□□□ -0.66
PAX4O43316 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.94□□□□□ -0.66
PAX4O43316 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.94□□□□□ -0.66
PAX4O43316 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 AC073957.3-201ENST00000609998 6758 ntBASIC10.94□□□□□ -0.66
PAX4O43316 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PAX4O43316 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.94□□□□□ -0.66
PAX4O43316 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.94□□□□□ -0.66
PAX4O43316 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms