Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PHF1O43189 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF1O43189 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
PHF1O43189 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF1O43189 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PHF1O43189 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF1O43189 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF1O43189 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF1O43189 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF1O43189 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF1O43189 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF1O43189 AC025048.3-201ENST00000590609 569 ntBASIC13.22□□□□□ -0.29
PHF1O43189 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.22□□□□□ -0.29
PHF1O43189 AC005702.4-201ENST00000618393 416 ntBASIC13.22□□□□□ -0.29
PHF1O43189 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF1O43189 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.22□□□□□ -0.29
PHF1O43189 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF1O43189 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF1O43189 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.21□□□□□ -0.29
PHF1O43189 AC020907.1-201ENST00000616460 1350 ntBASIC13.21□□□□□ -0.29
PHF1O43189 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PHF1O43189 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 AGAP7P-201ENST00000582299 2062 ntBASIC13.21□□□□□ -0.29
PHF1O43189 AGAP14-201ENST00000624701 2060 ntBASIC13.21□□□□□ -0.29
PHF1O43189 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.21□□□□□ -0.29
PHF1O43189 BRWD1P1-201ENST00000401091 371 ntBASIC13.21□□□□□ -0.29
PHF1O43189 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.21□□□□□ -0.29
PHF1O43189 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.21□□□□□ -0.29
PHF1O43189 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.21□□□□□ -0.29
PHF1O43189 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
PHF1O43189 AL589987.1-201ENST00000453380 819 ntBASIC13.21□□□□□ -0.29
PHF1O43189 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF1O43189 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.21□□□□□ -0.29
PHF1O43189 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PHF1O43189 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF1O43189 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.21□□□□□ -0.29
PHF1O43189 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF1O43189 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF1O43189 AC103810.3-201ENST00000583567 96 ntBASIC13.21□□□□□ -0.29
PHF1O43189 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF1O43189 SRD5A3P1-201ENST00000603021 949 ntBASIC13.21□□□□□ -0.29
PHF1O43189 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.21□□□□□ -0.29
PHF1O43189 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF1O43189 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
PHF1O43189 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF1O43189 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF1O43189 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF1O43189 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
PHF1O43189 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms