Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP2A1O14983 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 DPM3-202ENST00000368399 517 ntBASIC17.28■□□□□ 0.36
ATP2A1O14983 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP2A1O14983 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A1O14983 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP2A1O14983 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP2A1O14983 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A1O14983 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP2A1O14983 MIR4683-201ENST00000579659 81 ntBASIC17.28■□□□□ 0.36
ATP2A1O14983 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATP2A1O14983 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A1O14983 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A1O14983 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ATP2A1O14983 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP2A1O14983 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ATP2A1O14983 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP2A1O14983 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP2A1O14983 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ATP2A1O14983 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP2A1O14983 AC010141.1-201ENST00000411585 623 ntBASIC17.27■□□□□ 0.36
ATP2A1O14983 AL008707.1-201ENST00000422498 534 ntBASIC17.27■□□□□ 0.36
ATP2A1O14983 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP2A1O14983 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP2A1O14983 TUBB8P8-201ENST00000458717 1058 ntBASIC17.27■□□□□ 0.36
ATP2A1O14983 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.27■□□□□ 0.36
ATP2A1O14983 RHOQP1-201ENST00000555758 579 ntBASIC17.27■□□□□ 0.36
ATP2A1O14983 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 MIR4783-201ENST00000580343 82 ntBASIC17.27■□□□□ 0.36
ATP2A1O14983 AC005324.6-201ENST00000587972 613 ntBASIC17.27■□□□□ 0.36
ATP2A1O14983 AC009955.4-201ENST00000597192 544 ntBASIC17.27■□□□□ 0.36
ATP2A1O14983 BNIP3P13-201ENST00000599968 566 ntBASIC17.27■□□□□ 0.36
ATP2A1O14983 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ATP2A1O14983 AL162426.1-201ENST00000624141 743 ntBASIC17.27■□□□□ 0.36
ATP2A1O14983 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.27■□□□□ 0.36
ATP2A1O14983 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP2A1O14983 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A1O14983 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
ATP2A1O14983 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A1O14983 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A1O14983 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A1O14983 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.27■□□□□ 0.35
ATP2A1O14983 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A1O14983 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.27■□□□□ 0.35
ATP2A1O14983 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A1O14983 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A1O14983 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.27■□□□□ 0.35
ATP2A1O14983 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP2A1O14983 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ATP2A1O14983 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ATP2A1O14983 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP2A1O14983 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP2A1O14983 PRAL-201ENST00000624952 3286 ntBASIC17.26■□□□□ 0.35
ATP2A1O14983 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP2A1O14983 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP2A1O14983 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ATP2A1O14983 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 RN7SKP230-201ENST00000365642 335 ntBASIC17.26■□□□□ 0.35
ATP2A1O14983 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.26■□□□□ 0.35
ATP2A1O14983 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP2A1O14983 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP2A1O14983 AC002472.3-201ENST00000640124 621 ntBASIC17.26■□□□□ 0.35
ATP2A1O14983 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP2A1O14983 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP2A1O14983 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms