Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.03■□□□□ -0
TLR4O00206 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.03■□□□□ -0
TLR4O00206 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TLR4O00206 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 SLC25A24P2-201ENST00000415059 510 ntBASIC15.03■□□□□ -0
TLR4O00206 AC079178.1-201ENST00000420915 656 ntBASIC15.03■□□□□ -0
TLR4O00206 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.03■□□□□ -0
TLR4O00206 POM121L10P-201ENST00000436994 1285 ntBASIC15.03■□□□□ -0
TLR4O00206 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.03■□□□□ -0
TLR4O00206 AC091804.1-201ENST00000486888 567 ntBASIC15.03■□□□□ -0
TLR4O00206 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.03■□□□□ -0
TLR4O00206 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TLR4O00206 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.03■□□□□ -0
TLR4O00206 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.03■□□□□ -0
TLR4O00206 AC020914.3-201ENST00000594712 304 ntBASIC15.03■□□□□ -0
TLR4O00206 AC244157.2-201ENST00000616239 1006 ntBASIC15.03■□□□□ -0
TLR4O00206 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TLR4O00206 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.03■□□□□ -0
TLR4O00206 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TLR4O00206 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.02■□□□□ -0
TLR4O00206 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TLR4O00206 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TLR4O00206 AP002414.2-201ENST00000591780 3365 ntBASIC15.02■□□□□ -0
TLR4O00206 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.02■□□□□ -0
TLR4O00206 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.02■□□□□ -0
TLR4O00206 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.02■□□□□ -0
TLR4O00206 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.02■□□□□ -0
TLR4O00206 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.02■□□□□ -0
TLR4O00206 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.02■□□□□ -0
TLR4O00206 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.02■□□□□ -0
TLR4O00206 RPL5P21-201ENST00000404620 815 ntBASIC15.02■□□□□ -0
TLR4O00206 FNTAP2-201ENST00000430308 634 ntBASIC15.02■□□□□ -0
TLR4O00206 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.02■□□□□ -0
TLR4O00206 HSPB1P2-201ENST00000448722 546 ntBASIC15.02■□□□□ -0
TLR4O00206 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 SCARNA20.5-201ENST00000516991 142 ntBASIC15.02■□□□□ -0
TLR4O00206 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.02■□□□□ -0
TLR4O00206 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.02■□□□□ -0
TLR4O00206 AL603764.1-201ENST00000636452 321 ntBASIC15.02■□□□□ -0
TLR4O00206 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.02□□□□□ -0.01
TLR4O00206 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.02□□□□□ -0.01
TLR4O00206 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.02□□□□□ -0.01
TLR4O00206 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
TLR4O00206 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TLR4O00206 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TLR4O00206 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TLR4O00206 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TLR4O00206 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TLR4O00206 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TLR4O00206 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.01□□□□□ -0.01
TLR4O00206 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.01□□□□□ -0.01
TLR4O00206 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TLR4O00206 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TLR4O00206 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TLR4O00206 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.01□□□□□ -0.01
TLR4O00206 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TLR4O00206 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms