Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.86□□□□□ -0.19
NPIPA3F8WFD2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 FAM197Y7-201ENST00000432892 766 ntBASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AC148477.4-201ENST00000613430 1793 ntBASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA3F8WFD2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AC112693.3-201ENST00000624819 1983 ntBASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 CNN2P8-201ENST00000421872 913 ntBASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA3F8WFD2 AC023310.1-201ENST00000554836 735 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms