Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 KRT18P9-201ENST00000604826 1300 ntBASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C1QTNF9BB2RNN3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 PGAM1P12-201ENST00000505622 748 ntBASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 AC006548.2-201ENST00000605217 529 ntBASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 AC012073.1-201ENST00000606114 1108 ntBASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 AL603764.1-201ENST00000636452 321 ntBASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 AC022188.1-201ENST00000620960 1664 ntBASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 AC008741.2-201ENST00000612792 3115 ntBASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.1□□□□□ -0.15
C1QTNF9BB2RNN3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 DUTP3-201ENST00000450025 415 ntBASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 ORAOV1P1-201ENST00000503108 395 ntBASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AP000911.2-201ENST00000534330 502 ntBASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms