Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 UGT1A2P-201ENST00000454886 866 ntBASIC12.24□□□□□ -0.45
SRRM4A7MD48 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 MYO15B-237ENST00000642007 4893 ntBASIC12.24□□□□□ -0.45
SRRM4A7MD48 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SRRM4A7MD48 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SRRM4A7MD48 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 AC113367.3-201ENST00000508316 1912 ntBASIC12.23□□□□□ -0.45
SRRM4A7MD48 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.23□□□□□ -0.45
SRRM4A7MD48 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms