Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 MCCD1P2-201ENST00000423228 335 ntBASIC16.57■□□□□ 0.24
CCDC66A2RUB6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 AC040169.1-201ENST00000565382 521 ntBASIC16.57■□□□□ 0.24
CCDC66A2RUB6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 AP3S2-216ENST00000617003 1561 ntBASIC16.56■□□□□ 0.24
CCDC66A2RUB6 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 YBX2P1-201ENST00000394192 760 ntBASIC16.56■□□□□ 0.24
CCDC66A2RUB6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 C2-206ENST00000442278 2434 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC66A2RUB6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 NUTM2HP-201ENST00000442076 2498 ntBASIC16.55■□□□□ 0.24
CCDC66A2RUB6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 AC136604.1-201ENST00000418535 575 ntBASIC16.55■□□□□ 0.24
CCDC66A2RUB6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 TIMM8BP1-201ENST00000452384 211 ntBASIC16.55■□□□□ 0.24
CCDC66A2RUB6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms